PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG011845t2
Common NameTCM_011845
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 317aa    MW: 35012.2 Da    PI: 6.1259
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG011845t2genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.1e-1071109543
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                       k  rr+++NReAAr+sR+RKka++++Le+    L++  +
  Thecc1EG011845t2  71 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQ 109
                       788*************************97666665554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-864114No hitNo description
SMARTSM003384.7E-967138IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.41569113IPR004827Basic-leucine zipper domain
PfamPF077165.7E-769113IPR004827Basic-leucine zipper domain
CDDcd147082.08E-2471123No hitNo description
SuperFamilySSF579595.47E-771114No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
PfamPF141447.4E-32156229IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MYQKGTTFGA SLGNGHIENW ADSGLADNSQ QTDTSTDVDN DDKNQLNGVR HGAIITVDSV  60
DESKPKTGDQ KTLRRLAQNR EAARKSRLRK KAYVQQLENS RLRLTQLEQE LQRARQQGIF  120
ISSGLSGDHG HSVAGNGALA FDMDYAHWLD DHQRLINDLR SAVNSHMGDN ELRILVEGVM  180
AHYDEVFRLK SIGAKADVFH MLSGMWKTPA ERCFMWLGGF RSSELLKILG NHLEPLTDQQ  240
LMGICNLQQS SQQAEDALSQ GMEALQQSLV DTLSSACLGP AGSGNVADYM GQMAIAMGKL  300
ATLENFLHQA DLLRQQT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007046280.10.0BZIP transcription factor family protein isoform 1
RefseqXP_007046281.10.0BZIP transcription factor family protein isoform 2, partial
SwissprotQ9SX271e-152PAN_ARATH; Transcription factor PERIANTHIA
TrEMBLA0A061EBV90.0A0A061EBV9_THECC; BZIP transcription factor family protein isoform 2 (Fragment)
TrEMBLA0A061ECH80.0A0A061ECH8_THECC; BZIP transcription factor family protein isoform 1
STRINGPOPTR_0008s11710.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-140bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]